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(*Corresponding author)





  1. Zhand S., Zhu Y., Nazari H., Sadraeian M., Warkiani M. E., Jin D., Thiolate DNAzymes on gold nanoparticles for isothermal amplification and detection of mesothelioma-derived exosomal PD-L1 mRNA, Analytical Chemistry 95 (6), 3228-3237. DOI: 10.1021/acs.analchem.2c04046


  1. Huang G., Liu Y., Wang D., Zhu Y., Wen, S. Ruan J., Jin D., Upconversion nanoparticles for super-resolution quantification of single small extracellular vesicles, eLight 2 (1), 1-12. DOI: 10.1186/s43593-022-00031-1      

  2. ​Huang G., Zhu Y., Wen S., Mei H., Liu Y., Wang D., Maddahfar M., Su QP., Lin G., Chen Y., Jin D., Single Small Extracellular Vesicle (sEV) Quantification by Upconversion Nanoparticles, Nano Letters 2022, 22, 9, 3761–3769. DOI: 10.1021/acs.nanolett.2c00724  


  1. Zhu Y., Reece P. J., Differential Interference Contrast-Based Interrogation of Plasmonic Gold Nanohole Arrays for Label-Free Imaging Sensing, ACS Applied Nano Materials 4 (10), 10657-10664. DOI: 10.1021/ACSANM.1C02100

  2. Bai X., Ni J., Beretov J., Wasinger V. C., Wang S., Zhu Y., Graham P., Li Y., Activation of the eIF2/ATF4 axis drives triple-negative breast cancer radioresistance by promoting glutathione biosynthesis, Redox biology 43, 101993. DOI: 10.1016/J.REDOX.2021.101993

  3. Zhand S., Xiao K., Bazaz S. R., Zhu Y., Bordhan P., Jin D., Warkiani M. E., Improving capture efficiency of human cancer cell derived exosomes with nanostructured metal organic framework functionalized beads, Applied Materials Today 2021, 23, 100994. DOI: 10.1016/J.APMT.2021.100994

  4. Pang B., Zhu Y., Ni J., Ruan J., Thompson J., Malouf D., Bucci J., Graham P., Li Y. Quality assessment and comparison plasma-derived extracellular vesicles isolated by three commercial kits for prostate cancer diagnosis, International Journal of Nanomedicine, 2020;15:10241-10256. DOI: 10.2147/IJN.S283106 


  1. Huang G.; Lin G.; Zhu Y.; Duan W.; Jin D., Emerging Technologies for Profiling Extracellular Vesicle Heterogeneity, Lab on a Chip, 20, 2423-2437 (2020). DOI: 10.1039/D0LC00431F

  2. Khan M., Zhu Y, Yao Y., Zhang P., Agrawal A., Reece P., Impact of Metal Crystallinity-related Morphologies on the Sensing Performance of Plasmonic Nanohole Arrays, Nanoscale, 12, 7577-7585 (2020). DOI: 10.1039/D0NR00619J

  3. Pang B., Zhu Y., Ni J., Thompson J., Malouf D., Bucci J., Graham P., Li Y., Extracellular vesicles: the next generation of biomarkers for liquid biopsy-based prostate cancer diagnosis, Theranostics, 10(5):2309-2326 (2020). DOI: 10.7150/THNO.39486

  4. Chang L., Ni J., Zhu Y., Pang B., Graham P., Zhang H., Li Y., Liquid biopsy in ovarian cancer: recent advances in circulating extracellular vesicle detection for early diagnosis and monitoring progression, Theranostics, 9(14): 4130-4140 (2019). DOI: 10.7150/THNO.34692

  5. Feng X., Bai X., Ni J., Wasinger V., Beretov J. Deng J. Zhu Y., Graham P., CHTOP in chemoresistant epithelial ovarian cancer: a novel and potential therapeutic target, Frontiers in Oncology, 9(557) (2019). DOI: 10.3389/FONC.2019.00557

  6. Piya R., Zhu Y., Soeriyadi A. H., Silva S. M.; Reece J. P., Gooding J. J., Micropatterning of Porous Silicon Bragg Reflectors With Poly(Ethylene Glycol) to Fabricate Cell Microarrays: Towards Single Cell Sensing, Biosensors and Bioelectronics, 127, 229-235 (2019). DOI: 10.1016/J.BIOS.2018.12.001

  7. Chorsi H. T., Zhu Y., Zhang X. J., Patterned Plasmonic Surfaces-Theory, Fabrication, and Applications in Biosensing, Journal of Microelectromechanical Systems, 26 (4), 718-739 (2017). DOI: 10.1109/JMEMS.2017.2699864

  8. Yang Y., Ciampi S., Zhu Y., and Gooding J. J., Light-Activated Electrochemistry for the Two-Dimensional Interrogation of Electroactive Regions on a Monolithic Surface with Dramatically Improved Spatial Resolution, The Journal of Physical Chemistry C, 120 (24), 13032–13038 (2016). DOI: 10.1021/ACS.JPCC.6B02289

  9. Zhu Y., Kekalo K., NDong C., Huang Y.-Y., Shubitidze F., Griswold K. E., Baker I., Zhang X. J., Magnetic-Nanoparticle-Based Immunoassays-on-Chip: Materials Synthesis, Surface Functionalization, and Cancer Cell Screening, Advanced Functional Materials, 26, 3953–3972 (2016). DOI: 10.1002/ADFM.201504176


  1. Choudhury M. H., Ciampi S., Yang Y., Tavallaie R., Zhu Y., Zarei L., Gonçales V. R., Gooding J. J., Connecting electrodes with light: one wire, many electrodes, Chemical Science, 6, 6769-6776 (2015). DOI: 10.1039/C5SC03011K

  2. Zhu Y., Soeriyadi A. H., Parker S. G., Reece P. J., Gooding J. J., Chemical patterning on preformed porous silicon photonic crystals: Towards multiplex detection of protease activity at precise positions, Journal of Materials Chemistry B, 2, 3582-3588 (2014). DOI: 10.1039/C4TB00281D 

  3. Zhu Y., Gupta B., Guan B., Ciampi S., Reece P. J., Gooding J.J., Photolithographic Strategy for Patterning Preformed, Chemically Modified, Porous Silicon Photonic Crystal Using Click Chemistry, ACS Applied Materials & Interfaces, 5 (14), 6514-6521 (2013). DOI: 10.1021/AM4006012 

  4. Ngalim S. H., Magenau A., Zhu Y., Tønnesen L., Fairjones Z., Gooding J. J., Böcking T., Gaus K., Creating Adhesive and Soluble Gradients for Imaging Cell Migration with Fluorescence Microscopy, Journal of Visualized Experiments, e50310-e50310 (2013). DOI: 10.3791/50310

  5. Gupta B., Zhu Y., Guan B., Reece P. J., Gooding J. J., Functionalised porous silicon as a biosensor: emphasis on monitoring cells in vivo and in vitro, Analyst 138 (13), 3593-3615 (2013). DOI: 10.1039/C3AN00081H

  6. Ciampi S., Guan B., Darwish N. A., Zhu Y., Reece P. J., Gooding J. J.,A multimodal optical and electrochemical device for monitoring surface reactions: redox active surfaces in porous silicon Rugate filters, Physical Chemistry Chemical Physics 14 (47), 16433-16439 (2012). DOI: 10.1039/C2CP43461J

  7. Zhu Y., Lv B., Zhang P., Ma H., Swelling induced Au–S bond breakage is determined by the molecular composition of surface tethered copolymers—carboxylated poly (OEGMA-r-HEMA), Chemical Communications 47 (35), 9855-9857 (2011). DOI: 10.1039/C1CC13106K

  8. Zhang Y., He J., Zhu Y., Chen H., Ma H., Directly observed Au–S bond breakage due to swelling of the anchored polyelectrolyte, Chemical Communications 47 (4), 1190-1192 (2011). DOI: 10.1039/C0CC04291A

  9. Zhu Y., Yang D., Ma H., One-step fabrication of porous polymeric microcage via electrified jetting, Nanoscale 2 (6), 910-912 (2010). DOI: 10.1039/C0NR00081G

Before 2010

  1. Yang D., Liu X., Jin Y., Zhu Y., Zeng D., Jiang X., Ma H., Electrospinning of poly (dimethylsiloxane)/poly (methyl methacrylate) nanofibrous membrane: Fabrication and application in protein microarrays, Biomacromolecules 10 (12), 3335-3340 (2009). DOI: 10.1021/BM900955P

Book chapter 


  1. Gooding J. J. and Zhu Y., ‘Modifying porous silicon with self-assembled monolayers for biomedical applications’, in Santos H. (eds), Porous Silicon for Biomedical Applications, Woodhead Publishing, pp. 81-103 (2014). DOI: 10.1533/9780857097156.1.81


Conference proceeding
  1. Bai X., Feng X.  Ni J.,  Beretov J.,  Deng J.,  Zhu Y., Graham P.,  Li Y., CHTOP is a novel therapeutic target for chemoresistant epithelial ovarian cancer therapy, Cancer Research, July 1 2019 (79) (13 Supplement) 4754. DOI: 10.1158/1538-7445.AM2019-4754

  2. Soeriyadi A. H., Zhu Y., Reece P. J., Gooding J. J., Modification of porous silicon rugate filters through thiol-yne photochemistry, AIP Conference Proceedings, 1586 (1), 35-38 (2014). DOI: 10.1063/1.4866725


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